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BODC Vocab Library
S03 (BODC parameter semantic model sample preparation entity descriptions)
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ConceptID
S031
S0310
S03100
S03101
S03102
S03103
S03104
S03105
S03106
S03107
S03108
S03109
S0311
S03110
S03111
S03112
S03113
S03114
S03115
S03116
S03117
S03118
S03119
S0312
S03120
S03121
S03122
S03123
S03124
S03125
S03127
S03128
S03129
S0313
S03131
S03132
S03133
S03134
S03135
S03136
S03137
S03138
S03139
S0314
S03142
S03143
S03144
S03145
S03146
S03149
S0315
S03150
S03151
S03152
S03153
S03154
S03156
S0316
S03160
S03161
S03162
S03163
S03164
S03165
S03166
S03167
S03168
S03169
S0317
S03171
S03172
S03173
S03174
S03175
S03176
S03177
S03178
S03179
S0318
S03180
S03181
S03182
S03183
S03184
S03185
S03186
S03187
S03188
S03189
S0319
S03190
S03191
S03192
S03193
S03194
S03195
S03196
S03197
S03198
S032
S0320
S03200
S03202
S03204
S03205
S03207
S03208
S0321
S03210
S03211
S03212
S03213
S03214
S03215
S03216
S03217
S03218
S03219
S0322
S03220
S03221
S03222
S03223
S03224
S03225
S03226
S03227
S03228
S0323
S03230
S03231
S03233
S03234
S03235
S03236
S0324
S0325
S0326
S0328
S0329
S033
S0330
S0331
S0332
S0333
S0334
S0335
S0336
S0337
S0338
S0339
S034
S0340
S03401
S03402
S03403
S03404
S03405
S03406
S03407
S03408
S03409
S0341
S03410
S03411
S03412
S03413
S03414
S03415
S03416
S03417
S03418
S03419
S0342
S03420
S03421
S03422
S03423
S03424
S03425
S03426
S03427
S03428
S03429
S0343
S03430
S03431
S03432
S03433
S03434
S03435
S03436
S03437
S03438
S03439
S0344
S03440
S03441
S03442
S03443
S03444
S03445
S03446
S03447
S03448
S03449
S0345
S03450
S03451
S03452
S03453
S03454
S03455
S03456
S03457
S03458
S03459
S0346
S03460
S03461
S03462
S03463
S03464
S03465
S03466
S03467
S03468
S03469
S0347
S03470
S03471
S03472
S03473
S03474
S03475
S0348
S0349
S035
S0351
S0352
S0353
S0354
S0355
S0357
S0358
S0359
S0360
S0361
S0362
S0363
S0365
S0366
S0367
S0368
S0369
S037
S0370
S0371
S0372
S0373
S0374
S0375
S0376
S0377
S0378
S038
S0380
S0381
S0382
S0383
S0384
S0385
S0386
S0387
S0388
S0389
S039
S0390
S0391
S0392
S0393
S0394
S0395
S0396
S0397
S0398
S0399
S0400
S0401
S0402
S0403
Preferred label
0.25M hydroxylamine hydrochloride + 25% acetic acid leaching
14C leucine doping, incubation, acidification, purging and trapping CO2
14C-glucose doping, incubation in the dark, purging with air, acid washing
14CO3 doping, incubation at 100uE/m2/s, acidification, scintillant addition
14CO3 doping, incubation in the dark, acidification, scintillant addition
15N-tracer addition, incubation, fixation, gas purging and trapping
15N2-enriched seawater addition, on-deck incubation at simulated in-situ light level, filtration
1M sodium acetate at pH 5 + 0.25M hydroxylamine hydrochloride leaching
1M sodium acetate leaching at pH 5
35-S DMS doping, incubation in the dark, filtration
35-S DMS tracer doping, incubation in the dark, filtration, purging of volatiles
35-S DMSP doping, incubation in the dark, filtration
3H leucine doping, incubation in the dark, centrifugation
acetone extraction
acid digestion
acid digestion of filter residue
acid digestion of leached filter residue
acid digestion of leached sample residue
acid leaching of filter residue
acid liberation, purification and trapping CO2
acidification
acidification, combustion
acidification, isotope dilution
acidification, NaOH hydrolysis
acidification, NaOH hydrolysis, NaBH4 reduction
acridine orange staining
AgI precipitation
anion exchange chromatography
antibody doping
bulk aerosol extraction
carbon-13 isotope-labelled tracer addition, dawn-to-dawn on-deck incubation at simulated in-situ light level, filtration
cascade filtration, acetone extraction
cascade impaction
Ce-AS reaction
centrifugal extraction
centrifugal extraction, filtration
centrifugal extraction, filtration, acidification
centrifugal extraction, filtration, oxidation
centrifugation
centrifugation, acetone extraction
centrifugation, acid digestion
centrifugation, acidification
centrifugation, acidification, combustion
centrifugation, combustion
centrifugation, no acidification
chloroform extraction
combustion
combustion at 375C and acidification
compression into pellets
DAPI staining
DAPI/proflavine staining
denitrification to N2O by cultured bacteria
diffusive gel thin-film (DGT) sampling, extraction into HNO3
digestion, purification, plating
dilution experiment incubations
disaggregation
distillation
doping with fluorescine diacetate, incubation
drying
drying, grinding, NaOH extraction and filtration
drying, wet sieving <63um, dry sieving >63um
EDTA/SDS extraction
enzyme digestion, purging, cryogenic trapping
eosin staining
epibenthic sampling
equilibration with air, drying
equilibration with and cryogenic trapping of CO2
extraction by squeezing, filtration
extraction by squeezing, filtration, acidification
extraction by squeezing, filtration, barium/gelatine treatment
extraction, filtration
filtration
filtration with acid impregnated filter
filtration with Teflon filter
filtration, acetone extraction
filtration, acid digestion
filtration, acid leaching
filtration, acidification
filtration, acidification, chelation, solvent extraction
filtration, acidification, combustion
filtration, acidification, isotope dilution
filtration, acidification, pre-concentration, ion-exchange chromatography
filtration, acidification, UV irradiation
filtration, alkali hydrolysis
filtration, Bligh and Dyer extraction
filtration, combustion
filtration, denitrification to N2O by cultured bacteria
filtration, DNA extraction
filtration, DNA extraction, PicoGreen staining
filtration, DNA extraction, PicoGreen staining, primer selection
filtration, drying
filtration, ethanol extraction
filtration, freon extraction
filtration, HgCl2 preservation
filtration, hydrolysis
filtration, in-line preconcentration
filtration, incubation
filtration, incubation at unspecified light level, purging, cryogenic trapping
filtration, incubation in natural sunlight, enzyme reduction to DMS
filtration, incubation in natural sunlight, purging, cryogenic trapping
filtration, incubation in the dark, enzyme reduction to DMS
filtration, incubation in the dark, purging, cryogenic trapping
filtration, incubation in ultra-violet light, enzyme reduction to DMS
filtration, indophenol synthesis, SPE extraction, HPLC purification
filtration, leaching with pH 4.7 ammonium acetate buffer
filtration, light and dark bottle incubation
filtration, methanol extraction
filtration, Mn absorption
filtration, N, N-dimethylformamide extraction
filtration, NaOH hydrolysis, NaBH4 reduction
filtration, no acidification
filtration, ortho-phthalaldehyde reaction
filtration, oxidation
filtration, pH adjusted to 7.2
filtration, pH adjusted to 7.6
filtration, pH adjusted to 8.05
filtration, plating
filtration, precipitation, acidification
filtration, purging, cryogenic trapping
filtration, reaction with orthophthalic acid
filtration, sudan-1 synthesis, SPE extraction, HPLC purification
filtration, suspension of residue in buffer solution, collection of liberated DMS
filtration, thin-film preparation
filtration, ultrasonication extraction
filtration, UV digestion
filtration, water leaching
filtration, water leaching, acid hydrolysis of the leachate
filtration, water leaching, acid hydrolysis of the residue
fixed volume sampling, sieving, picking
flux-diluted fused bead preparation
grazing experiment based on the method of Gifford (1993)
H2O2 + 1M ammonium acetate leaching at pH 2
high temperature reduction in contact with carbon
high temperature reduction in contact with zinc
hydrolysis
identification by optical microscopy
ignition at 400C
in-situ incubation
in-situ incubation dilution experiment
in-situ light and dark bottle incubation
in-situ pore water sampling, filtration
in-situ pore water sampling, filtration, chelation, solvent extraction
incubation
incubation at constant temperature
incubation at full natural light level
incubation in filtered seawater
incubation in the dark
incubation under ultra-violet light
isotope-labelled tracer addition, antibiotic poisoning, incubation in the dark, cascade filtration
isotope-labelled tracer addition, antibiotic poisoning, incubation in the dark, filtration
isotope-labelled tracer addition, azide poisoning, incubation at unspecified light level, cascade filtration
isotope-labelled tracer addition, azide poisoning, incubation at unspecified light level, filtration
isotope-labelled tracer addition, DCMU poisoning, incubation at unspecified light level, cascade filtration
isotope-labelled tracer addition, DCMU poisoning, incubation at unspecified light level, filtration
isotope-labelled tracer addition, in-situ incubation, cascade filtration
isotope-labelled tracer addition, in-situ incubation, filtration
isotope-labelled tracer addition, incubation at different light levels, cascade filtration
isotope-labelled tracer addition, incubation at different light levels, filtration
isotope-labelled tracer addition, incubation at unspecified light level, cascade filtration
isotope-labelled tracer addition, incubation at unspecified light level, filtration
isotope-labelled tracer addition, incubation in the dark, filtration
isotope-labelled tracer addition, incubation, filtration, acidification
isotope-labelled tracer addition, incubation, filtration, acidification, gas trapping
isotope-labelled tracer addition, incubation, filtration, indophenol synthesis, SPE extraction
isotope-labelled tracer addition, incubation, filtration, sudan-1 synthesis, SPE extraction, HPLC purification
isotope-labelled tracer addition, on-deck incubation at simulated in-situ light level, cascade filtration
isotope-labelled tracer addition, on-deck incubation at simulated in-situ light level, cascade filtration, acidification
isotope-labelled tracer addition, on-deck incubation at simulated in-situ light level, filtration
isotope-labelled tracer addition, on-deck incubation at simulated in-situ light level, filtration, acidification
isotope-labelled tracer addition, on-deck incubation at simulated in-situ light level, filtration, acidification, gas trapping
isotope-labelled tracer addition, pulse-chase incubations, fixation, SYBR Green I staining, flow sorting
isotopic dilution time-series incubations, filtration
laboratory rock sample leaching
leaching
leaching with 0.25M hydroxylamine hydrochloride + 25% acetic acid of leached sample residue from stage 3 in Chester et al (1988)
leaching with 1M ammonium acetate at pH 7
leaching with 1M sodium acetate at pH 5 + 0.25M hydroxylamine hydrochloride of leached sample residue from stage 2 in Chester et al (1988)
leaching with 1M sodium acetate at pH 5 of leached sample residue from stage 1 of Chester et al (1988)
leaching with ascorbic acid
leaching with citrate dithionite of ascorbic acid-leached sample residue
leaching with H2O2 + 1M ammonium acetate at pH 2 of leached sample residue from stage 4 in Chester et al (1988)
light and dark bottle incubation
marine snow catcher sampling, settling
melting of core section
mesocosm simulated resuspension
methanol extraction
micromilling
Millipore prefiltration
Millipore prefiltration purging, cryogenic trapping
NaOH hydrolysis
no acidification
no preservation and no staining
no staining
not specified
on-deck incubation
on-deck incubation at simulated in-situ light level, DCMU poisoning
on-deck incubation dilution experiment
on-deck incubation with nutrients
on-deck incubation with nutrients, filtration
on-deck incubation without nutrients
on-deck incubation without nutrients, filtration
on-deck light and dark bottle incubation
on-deck mesocosm incubation
oxalic acid extraction
oxidation
parallel incubations with and without added grazers
parallel incubations with and without grazers, acridine orange staining
parallel screened water incubations with and without added grazers, grazer removal, filtration
parallel screened water incubations with and without added grazers, grazer removal, filtration, acidification
passive sampling
persulphate digestion
photolytic conversion to NO
picking
plating
polyacrylamide gel probe sampling
polymerase chain reaction with p1-7 primer; serial dilution
polymerase chain reaction with p3-42 primer; serial dilution
polymerase chain reaction with True Agg58 primer; serial dilution
polymerase chain reaction with universal primer; serial dilution
preservation and no staining
preservation, filtration
preservation, filtration, SYBR Green I staining, flow sorting
protocol of Barber et al. (1994)
purging, cryogenic trapping
purging, sorbent tube trapping
PvI incubation, acidification to remove residual inorganic 14C
PvI Incubation, cascade filtration
PvI incubation, filtration
round-mesh sieving, picking
screening, in-situ incubation dilution experiment
screening, on-deck incubation dilution experiment
sediment trapping
sediment trapping, acetone extraction
sediment trapping, acid digestion
sediment trapping, acid hydrolysis
sediment trapping, acidification
sediment trapping, combustion
sediment trapping, digestion, purification, plating
sediment trapping, methanol extraction
sediment trapping, no acidification
sediment trapping, oxidation
sediment trapping, solvent extraction
sediment trapping, volume measurement, drying
separation in bromoform
shower-head equilibration with air, drying
sieving and picking under an optical microscope
sieving, picking
siphoning
size fractionation
solvent extraction
Soxhlet extraction
square-mesh sieving, picking
strong acid with HF acid digestion
SYBR Green I staining
tracer doping, antibiotic poisoning, incubation at 100uE/m2/s light level, cascade filtration
tracer doping, antibiotic poisoning, incubation at 100uE/m2/s light level, filtration
tracer doping, antibiotic poisoning, incubation at 188uE/m2/s light level, cascade filtration
tracer doping, antibiotic poisoning, incubation at 188uE/m2/s light level, filtration
tracer doping, azide poisoning, incubation at 100uE/m2/s light level, cascade filtration
tracer doping, incubation at 100uE/m2/s light level, cascade filtration
tracer doping, incubation at 100uE/m2/s light level, diffusion extraction of gas
tracer doping, incubation at 100uE/m2/s light level, filtration
tracer doping, incubation at 188uE/m2/s light level, cascade filtration
tracer doping, incubation at 188uE/m2/s light level, diffusion extraction of gas
tracer doping, incubation at 188uE/m2/s light level, filtration
tracer doping, incubation at 23uE/m2/s light level, filtration
tracer doping, incubation at 530uE/m2/s light level, cascade filtration
tracer doping, incubation at 530uE/m2/s light level, filtration
tracer doping, incubation at 80uE/m2/s light level, cascade filtration
tracer doping, incubation at 80uE/m2/s light level, filtration
tracer doping, incubation at unspecified light level, filtration, acidification
tracer doping, incubation at unspecified light levels, filtration, acidification
tracer doping, incubation in the dark
tracer doping, incubation in the dark, cascade filtration
tracer doping, on-deck incubation
tracer doping, on-deck incubation at full natural light level, cascade filtration
tracer doping, on-deck incubation at full natural light level, filtration
tracer doping, on-deck incubation at simulated in-situ light level
unfiltered seawater incubation in the dark
unspecified staining
UV digestion
vacuum filtration
variable volume sampling, sieving, picking
volume measurement, drying
wet sieving
wet sieving, acid digestion
wet sieving, acid digestion, stannous chloride reduction
wet sieving, acidification
wet sieving, drying
wet sieving, ignition at 400C
wet sieving, no acidification
Alt label
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